A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report
generated on 2025-02-20, 16:00 EST
based on data in:
/courses/BINF6430.202530/students/james.ri/STAR_salmon
General Statistics
| Sample Name | % Aligned | M Aligned | Library types |
|---|---|---|---|
| 050A_D708_D502_S11 | 96.1% | 8.3M | ISR |
| 050M_D709_D502_S12 | 95.7% | 9.2M | ISR |
| 192A_D704_D501_S7 | 95.1% | 8.0M | ISR |
| 192R_D705_D501_S8 | 95.0% | 6.5M | ISR |
| 247A_D706_D501_S9 | 96.3% | 7.9M | ISR |
| 247O_D707_D501_S10 | 96.3% | 9.3M | ISR |
| M1SA_D711_D504_S17 | 92.5% | 5.9M | ISR |
| M1SB_D712_D504_S18 | 92.3% | 5.9M | ISR |
| OPMA_D701_D503_S13 | 95.7% | 8.5M | ISR |
| OPMB_D710_D504_S16 | 96.0% | 7.1M | ISR |
| RPMA_D702_D503_S14 | 95.8% | 8.2M | ISR |
| RPMB_D703_D503_S15 | 95.9% | 7.4M | ISR |
Salmon
1.10.3
Quantifies expression of transcripts using RNA-seq data.URL: https://combine-lab.github.io/salmonDOI: 10.1038/nmeth.4197
Software Versions
Software Versions lists versions of software tools extracted from file contents.
| Software | Version |
|---|---|
| Salmon | 1.10.3 |